Preface |
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xix | |
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PART 1 Collective Behaviors in Active-matter Systems |
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1 Dry, Aligning, Dilute, Active Matter: A Synthetic and Self-contained Overview |
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3 | (49) |
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4 | (3) |
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1.2 Particle-level Phenomenology of the Three Basic DADAM Classes |
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7 | (12) |
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1.3 Hydrodynamic Theories for the Three Basic DADAM Classes |
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19 | (27) |
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1.4 Discussion and Perspectives |
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46 | (6) |
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2 Why Walking Is Easier Than Pointing: Hydrodynamics of Dry Active Matter |
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52 | (50) |
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52 | (7) |
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2.2 Dynamical "Derivation" of the Mermin-Wagner Theorem |
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59 | (7) |
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2.3 Formulating the Hydrodynamic Model |
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66 | (13) |
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2.4 Solving the Hydrodynamic Model |
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79 | (17) |
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2.5 20-20 Hindsight Handwaving Argument |
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96 | (6) |
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3 Collective Motion in Active Materials: Model Experiments |
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102 | (28) |
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102 | (3) |
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105 | (10) |
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115 | (11) |
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126 | (4) |
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4 Features of Interfaced and Confined Experimental Active Nematics |
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130 | (18) |
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4.1 Active Nematic Free and Under Lateral Confinement |
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131 | (7) |
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4.2 Free and Laterally Confined Active Nenamtics |
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138 | (10) |
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5 Phases of Planar Active Matter in Two Dimensions |
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148 | (32) |
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149 | (3) |
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5.2 Models and Observables |
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152 | (10) |
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5.3 A Reminder on Phase Transitions |
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162 | (2) |
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5.4 Equilibrium Phases in Two Dimensions |
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164 | (6) |
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170 | (5) |
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175 | (5) |
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180 | (39) |
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6.1 Field Theories in Soft Matter |
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180 | (8) |
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6.2 Active Versus Passive Field Theories |
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188 | (7) |
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6.3 From Scalar Active Particles to Scalar Field Theory |
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195 | (7) |
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6.4 Entropy Production in Active Field Theories |
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202 | (3) |
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205 | (2) |
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207 | (6) |
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6.7 Conclusion and Outlook |
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213 | (6) |
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PART 2 Passive and Active Colloidal Systems |
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7 Active Brownian Particles with Programmable Interaction Rules |
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219 | (11) |
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Tobias Bduerle Clemens Bechinger |
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219 | (2) |
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7.2 Self-propulsion of Active Brownian Particles Induced by Light |
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221 | (2) |
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7.3 Experimental Realization of Quorum Sensing with ABPS |
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223 | (2) |
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225 | (2) |
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7.5 Conclusion and Outlook |
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227 | (3) |
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230 | (64) |
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230 | (2) |
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8.2 What Is Diffusiophoresis? |
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232 | (5) |
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8.3 Microscopic Theory of Diffusiophoresis |
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237 | (2) |
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8.4 Self-diffusiophoresis |
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239 | (2) |
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8.5 Stochastic Dynamics of Phoretically Active Particles |
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241 | (3) |
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8.6 Experiments on Self-phoresis |
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244 | (3) |
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8.7 Apolar Active Colloids: Swarming Due to External Steering |
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247 | (3) |
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8.8 Mixtures of Apolar Active Colloids: Active Molecules |
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250 | (4) |
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8.9 Mixtures of Apolar Active Colloids: Stability of Suspensions |
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254 | (6) |
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8.10 Polar Active Colloids: Moment Expansion |
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260 | (11) |
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8.11 Polar Active Colloids: Scattering and Orbiting |
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271 | (1) |
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8.12 Nonequilibrium Dynamics of Active Enzymes |
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272 | (9) |
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8.13 Phoresis on the Slow Lane: Trail-following Bacteria |
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281 | (8) |
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8.14 Chemotaxis and Cell Division |
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289 | (1) |
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290 | (4) |
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9 Nanotribology of Commensurate and Incommensurate Colloidal Monolayers on Periodic Surfaces |
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294 | (13) |
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294 | (2) |
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9.2 Topological Excitations in Commensurate and Incommensurate Monolayers |
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296 | (1) |
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9.3 Vanishing Static Friction: The Aubry Transition |
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297 | (4) |
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9.4 Conclusion and Outlook |
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301 | (6) |
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PART 3 From Biophysics to Active Matter |
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10 Tissues as Active Materials |
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307 | (40) |
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10.1 Macroscopic and Hydrodynamic Description of Tissues |
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308 | (3) |
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10.2 Tissue Fluidization by Cell Division |
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311 | (13) |
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10.3 Active Matter: Active Gel Theory |
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324 | (9) |
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10.4 Tissues with Nematic Order |
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333 | (3) |
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10.5 Multicellular Spheroids |
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336 | (8) |
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344 | (3) |
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11 Self-organization of Protein Patterns |
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347 | (99) |
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347 | (3) |
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350 | (10) |
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11.3 Protein Reaction Kinetics |
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360 | (22) |
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11.4 Spatially Extended Two-component Systems |
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382 | (25) |
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11.5 The Role of Bulk-boundary Coupling for Membrane Patterns |
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407 | (16) |
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11.6 Control Space Dynamics |
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423 | (6) |
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11.7 Conclusions and Outlook |
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429 | (17) |
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12 Active Materials: Biological Benchmarks and Transport Limitations |
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446 | (15) |
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446 | (1) |
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12.2 Metabolism: The Activity of Life |
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447 | (4) |
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12.3 Transport Limitations |
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451 | (5) |
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456 | (5) |
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PART 4 Nonequilibrium Statistical Physics: From Passive to Active |
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13 Modeling the Microscopic Origins of Active Transport |
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461 | (45) |
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461 | (5) |
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13.2 Entropy Production J |
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466 | (7) |
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473 | (7) |
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13.4 Linear Response Theory |
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480 | (8) |
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488 | (10) |
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13.6 Forward-flux Sampling |
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498 | (8) |
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500 | (6) |
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14 Fluctuation-induced Forces In and Out of Equilibrium |
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506 | (34) |
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506 | (11) |
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14.2 Shape Dependence of FIF |
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517 | (9) |
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14.3 Role of Boundary Conditions |
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526 | (4) |
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14.4 Fluctuation-induced Forces (FIF) Out of Equilibrium |
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530 | (10) |
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540 | (51) |
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15.1 Equilibrium Statistical Mechanics |
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540 | (9) |
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15.2 Out of Equilibrium and "Why Not?" Questions |
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549 | (3) |
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15.3 "Why Not?" Questions |
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552 | (1) |
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15.4 Glassy Dynamics and Jamming Transition |
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553 | (8) |
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561 | (19) |
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580 | (11) |
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16 Forces in Dry Active Matter |
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591 | (31) |
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591 | (1) |
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16.2 A Short Recap of Different Expressions for Pressure |
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592 | (4) |
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16.3 The Mechanical Pressure of Noninteracting Self-propelled Particles |
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596 | (7) |
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16.4 Run-and-tumble Particles (RTPs) in ID: Nonlocal Steady State and Equation of State |
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603 | (3) |
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16.5 Momentum and Active Impulse |
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606 | (8) |
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16.6 Objects Immersed in an Active Bath: Currents and Forces |
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614 | (8) |
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17 Rheology of Complex and Active Fluids |
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622 | |
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17.1 Introduction to Rheology |
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623 | (5) |
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17.2 Continuum Rheological Modeling |
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628 | (3) |
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17.3 Shear Banding of Complex Fluids |
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631 | (3) |
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17.4 Active Fluids: Spontaneous Shear Banding and Active Turbulence |
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634 | (8) |
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642 | |