E-grāmata: Bioinformatics Research and Applications: 19th International Symposium, ISBRA 2023, Wroclaw, Poland, October 9-12, 2023, Proceedings

Unveiling the Robustness of Machine Learning Models in Classifying
COVID-19 Spike Sequences.- Efficient Sequence Embedding For SARS-CoV-2
Variants Classification.- On Computing the Jaro Similarity Between Two
Strings.- Identifying miRNA-disease Associations based on Simple Graph
Convolution with DropMessage and Jumping Knowledge.- Reconciling Inconsistent
Molecular Structures from Biochemical Databases.- Deep Learning Architectures
For the Prediction of YY1-Mediated Chromatin Loops.- Neurogenesis-associated
Protein, a Potential Prognostic Biomarker in anti-PD-1 based kidney renal
clear cell carcinoma patients therapeutics.- MPFNet: ECG Arrhythmias
Classication Based on Multi-Perspective Feature Fusion.- PCPI: Prediction of
circRNA and protein interaction using machine learning method.- Radiology
Report Generation via Visual Recalibration and Context Gating-aware.- Using
Generating Functions to Prove Additivity of Gene-Neighborhood
BasedPhylogenetics.- TCSA: A Text-guided Cross-view Medical Semantic
Alignment Framework for Adaptive Multi-view Visual Representation
Learning.- Multi-Class Cancer Classification of Whole Slide Images through
Transformer and Multiple Instance Learning.- ricME: long-read based mobile
element variant detection using sequence realignment and identity
calculation.- scGASI: A graph autoencoder-based single-cell integration
clustering method.- ABCAE: Artificial Bee Colony Algorithm with Adaptive
Exploitation for Epistatic Interaction Detection.- USTAR: Improved
Compression of k-mer Sets with Counters Using De Bruijn Graphs.- Graph-Based
Motif Discovery in Mimotope Profiles of Serum Antibody
Repertoire.- Sequence-Based Nanobody-Antigen Binding
Prediction.- Approximating Rearrangement Distances with Replicas and Flexible
Intergenic Regions.- The Ordered Covering Problem in Distance
Geometry.- Phylogenetic Information as Soft Constraints in RNA Secondary
Structure Prediction.- NeoMS: Identification of Novel MHC-I Peptides with
Tandem Mass Spectrometry.- On Sorting by Flanked Transpositions.- Integrative
analysis of gene expression and alternative polyadenylation from single-cell
RNA-seq data.- SaID: Simulation-aware Image Denoising Pre-trained Model for
Cryo-EM Micrographs.- Reducing the impact of domain rearrangement on sequence
alignment and phylogeny reconstruction.- Identification and functional
annotation of circRNAs in neuroblastoma based on bioinformatics.- SGMDD:
Subgraph Neural Network-Based Model for Analyzing Functional Connectivity
Signatures of Major Depressive Disorder.- PDB2Vec: Using 3D Structural
Information For Improved Protein Analysi.- Hist2Vec: Kernel-Based Embeddings
for Biological Sequence Classification.- DCNN: Dual-Level Collaborative
Neural Network for Imbalanced Heart Anomaly Detection.- On the Realisability
of Chemical Pathways.- A Brief Study ofGene Co-Expression Thresholding
Algorithms.- Inferring Boolean Networks from Single-Cell Human Embryo
Datasets.- Enhancing t-SNE Performance for Biological Sequencing Data through
Kernel Selection.- Genetic Algorithm with Evolutionary Jumps.- HetBiSyn:
Predicting Anticancer Synergistic Drug Combinations Featuring Bi-perspective
Drug Embedding with Heterogeneous Data.- Clique-based topological
characterization of chromatin interaction hubs.- Exploring Racial Disparities
in Triple-Negative Breast Cancer: Insights from Feature Selection
Algorithms.- Deep Learning Reveals Biological Basis of Racial Disparities in
Quadruple-Negative Breast Cancer.- CSA-MEM: Enhancing Circular DNA Multiple
Alignment through Text Indexing Algorithms.- A Convolutional Denoising
Autoencoder for Protein Scaffold Filling.- Simulating tumor evolution from
scDNA-seq as an accumulation of both SNVs and CNAs.- CHLPCA:
Correntropy-Based Hypergraph Regularized Sparse PCA for Single-cell Type
Identification.-