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CRISPR: Methods and Protocols Softcover reprint of the original 1st ed. 2015 [Mīkstie vāki]

  • Formāts: Paperback / softback, 366 pages, height x width: 254x178 mm, weight: 7978 g, 37 Illustrations, color; 26 Illustrations, black and white; XIV, 366 p. 63 illus., 37 illus. in color., 1 Paperback / softback
  • Sērija : Methods in Molecular Biology 1311
  • Izdošanas datums: 09-Oct-2016
  • Izdevniecība: Humana Press Inc.
  • ISBN-10: 1493954288
  • ISBN-13: 9781493954285
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  • Cena: 109,38 €*
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  • Formāts: Paperback / softback, 366 pages, height x width: 254x178 mm, weight: 7978 g, 37 Illustrations, color; 26 Illustrations, black and white; XIV, 366 p. 63 illus., 37 illus. in color., 1 Paperback / softback
  • Sērija : Methods in Molecular Biology 1311
  • Izdošanas datums: 09-Oct-2016
  • Izdevniecība: Humana Press Inc.
  • ISBN-10: 1493954288
  • ISBN-13: 9781493954285
Citas grāmatas par šo tēmu:

This volume presents a list of cutting-edge protocols for the study of CRISPR-Cas defense systems and their applications at the genomic, genetic, biochemical and structural levels. CRISPR: Methods and Protocols guides readers through techniques that have been developed specifically for the analysis of CRISPR-Cas and techniques adapted from standard protocols of DNA, RNA and protein biology. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

Authoritative and cutting-edge, CRISPR: Methods and Protocols provides a broad list of tools and techniques to study the interdisciplinary aspects of the prokaryotic CRISPR-Cas defense systems.

Preface v
Contributors xi
1 Investigating CRISPR RNA Biogenesis and Function Using RNA-seq
1(22)
Nadja Heidrich
Gaurav Dugar
Jorg Vogel
Cynthia M. Sharma
2 In Vitro Co-reconstitution of Cas Protein Complexes
23(12)
Andre Plagens
Lennart Randau
3 Analysis of CRISPR Pre-crRNA Cleavage
35(12)
Erin L. Garside
Andrew M. MacMillan
4 Annotation and Classification of CRISPR-Cas Systems
47(30)
Kira S. Makarova
Eugene V. Koonin
5 Computational Detection of CRISPR/crRNA Targets
77(14)
Ambarish Biswas
Peter C. Fineran
Chris M. Brown
6 High-Throughput CRISPR Typing of Mycobacterium tuberculosis Complex and Salmonella enterica Serotype Typhimurium
91(20)
Christophe Sola
Edgar Abadia
Simon Le Hello
Francois-Xavier Weill
7 Spacer-Based Macroarrays for CRISPR Genotyping
111(22)
Igor Mokrousov
Nalin Rastogi
8 Analysis of crRNA Using Liquid Chromatography Electrospray Ionization Mass Spectrometry (LC ESI MS)
133(14)
Sakharam P. Waghmare
Alison O. Nwokeoji
Mark J. Dickman
9 Rapid Multiplex Creation of Escherichia coli Strains Capable of Interfering with Phage Infection Through CRISPR
147(14)
Alexandra Strotksaya
Ekaterina Semenova
Ekaterina Savitskaya
Konstantin Severinov
10 Exploring CRISPR Interference by Transformation with Plasmid Mixtures: Identification of Target Interference Motifs in Escherichia coli
161(10)
Cristobal Almendros
Francisco J.M. Mojica
11 Electrophoretic Mobility Shift Assay of DNA and CRISPR-Cas Ribonucleoprotein Complexes
171(14)
Tim Kunne
Edze R. Westra
Stan J.J. Brouns
12 Expression and Purification of the CMR (Type III-B) Complex in Sulfolobus solfataricus
185(10)
Jing Zhang
Malcolm F. White
13 Procedures for Generating CRISPR Mutants with Novel Spacers Acquired from Viruses or Plasmids
195(28)
Marie-Eve Dupuis
Rodolphe Barrangou
Sylvain Moineau
14 Archaeal Viruses of the Sulfolobales: Isolation, Infection, and CRISPR Spacer Acquisition
223(10)
Susanne Erdmann
Roger A. Garrett
15 Using the CRISPR-Cas System to Positively Select Mutants in Genes Essential for Its Function
233(18)
Ido Yosef
Moran G. Goren
Rotem Edgar
Udi Qimron
16 Analysis of Nuclease Activity of Casl Proteins Against Complex DNA Substrates
251(14)
Natalia Beloglazova
Sofia Lemak
Robert Flick
Alexander F. Yakunin
17 Characterizing Metal-Dependent Nucleases of CRISPR-Cas Prokaryotic Adaptive Immunity Systems
265(12)
Ki H. Nam
Matthew P. DeLisa
Ailong Ke
18 Cas3 Nuclease--Helicase Activity Assays
277(16)
Tomas Sinkunas
Giedrius Gasiunas
Virginijus Siksnys
19 Chemical and Enzymatic Footprint Analyses of R-Loop Formation by Cascade-crRNA Complex
293(14)
Umit Pul
20 Creation and Analysis of a Virome: Using CRISPR Spacers
307(10)
Michelle Davison
Devaki Bhaya
21 Targeted Mutagenesis in Zebrafish Using CRISPR RNA-Guided Nucleases
317(18)
Woong Y. Hwang
Yanfang Fu
Deepak Reyon
Andrew P. W. Gonzales
J. Keith Joung
Jing-Ruey Joanna Yeh
22 Precise Genome Editing of Drosophila with CRISPR RNA-Guided Cas9
335(14)
Scott J. Gratz
Melissa M. Harrison
Jill Wildonger
Kate M. O'Connor-Giles
23 Targeted Transcriptional Repression in Bacteria Using CRISPR Interference (CRISPRi)
349(14)
John S. Hawkins
Spencer Wong
Jason M. Peters
Ricardo Almeida
Lei S. Qi
Index 363