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Part I Introductory Chapters |
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Basic Idea About Nucleic Acids for Nonexperts |
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3 | (20) |
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3 | (1) |
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4 | (4) |
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8 | (6) |
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3.1 Secondary Structure of DNA: The Double Helix |
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9 | (1) |
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3.2 Other Secondary Structures of DNA/Types of DNA |
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10 | (1) |
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3.3 Physical and Chemical Properties of DNA |
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11 | (1) |
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3.4 From DNA to Chromosome |
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12 | (2) |
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14 | (1) |
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14 | (9) |
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15 | (1) |
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16 | (4) |
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20 | (1) |
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21 | (2) |
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General Steps During Isolation of DNA and RNA |
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23 | (10) |
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23 | (1) |
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2 Common Steps of Nucleic Acid Isolation |
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24 | (2) |
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3 Widely Used Extraction Methods |
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26 | (1) |
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4 DNA Extraction and Purification Based on Source Materials |
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27 | (1) |
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4.1 DNA Isolation from Microbes |
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27 | (1) |
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4.2 DNA Extraction from Animal Cells and Tissues |
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28 | (1) |
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4.3 DNA Extraction from Plant Tissues and Cells |
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28 | (1) |
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28 | (5) |
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29 | (4) |
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Phenol-Chloroform DNA Isolation Method |
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33 | (8) |
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1 Introduction of the Technique |
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33 | (1) |
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34 | (1) |
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34 | (3) |
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34 | (1) |
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35 | (1) |
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35 | (2) |
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37 | (1) |
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38 | (3) |
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38 | (1) |
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38 | (1) |
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39 | (2) |
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RNA Isolation by the Guanidinium-Acid-Phenol Method |
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41 | (6) |
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41 | (1) |
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42 | (1) |
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42 | (3) |
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42 | (1) |
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43 | (1) |
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43 | (2) |
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45 | (1) |
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46 | (1) |
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46 | (1) |
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Spin Column-Based Isolation of Nucleic Acid |
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47 | (8) |
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47 | (1) |
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48 | (1) |
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49 | (2) |
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49 | (1) |
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50 | (1) |
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50 | (1) |
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51 | (1) |
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52 | (3) |
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52 | (3) |
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Isolation of Plasmid DNA by Alkaline Lysis |
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55 | (8) |
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55 | (1) |
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56 | (1) |
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57 | (3) |
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57 | (1) |
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58 | (1) |
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58 | (2) |
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60 | (1) |
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60 | (3) |
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61 | (2) |
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DNA Isolation by Hydrophilic Ionic Liquid Treatment |
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63 | (6) |
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63 | (1) |
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64 | (1) |
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65 | (1) |
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65 | (1) |
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65 | (1) |
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65 | (1) |
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66 | (1) |
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67 | (2) |
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5.1 Food Safety Surveillance |
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67 | (1) |
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67 | (1) |
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68 | (1) |
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Lithium Chloride-Based Isolation of RNA |
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69 | (4) |
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69 | (1) |
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70 | (1) |
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70 | (1) |
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70 | (1) |
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70 | (1) |
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71 | (1) |
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71 | (1) |
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71 | (2) |
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72 | (1) |
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Isolation of Bacteriophage DNA by PEG Method |
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73 | (6) |
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73 | (1) |
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74 | (1) |
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74 | (2) |
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74 | (1) |
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75 | (1) |
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75 | (1) |
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76 | (1) |
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77 | (2) |
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77 | (1) |
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77 | (1) |
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77 | (1) |
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78 | (1) |
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DNA Isolation by Chelex Method |
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79 | (6) |
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79 | (1) |
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80 | (1) |
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80 | (2) |
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80 | (1) |
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81 | (1) |
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81 | (1) |
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82 | (1) |
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83 | (2) |
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83 | (1) |
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83 | (1) |
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83 | (1) |
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84 | (1) |
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DNA Isolation by Lysozyme and Proteinase K |
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85 | (4) |
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1 Introduction of the Technique |
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85 | (1) |
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86 | (1) |
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86 | (1) |
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86 | (1) |
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87 | (1) |
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3.3 Protocol for DNA Isolation |
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87 | (1) |
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87 | (1) |
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88 | (1) |
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88 | (1) |
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Isolation of DNA from Blood Samples by Salting Method |
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89 | (6) |
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89 | (1) |
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90 | (1) |
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90 | (2) |
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90 | (1) |
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90 | (1) |
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3.3 Procedure for DNA Extraction |
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91 | (1) |
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92 | (1) |
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93 | (2) |
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93 | (2) |
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CTAB or SDS-Based Isolation of Plant's DNA |
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95 | (12) |
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95 | (1) |
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96 | (2) |
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98 | (5) |
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98 | (1) |
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98 | (1) |
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99 | (4) |
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103 | (1) |
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103 | (4) |
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105 | (2) |
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DNA Extraction by Spooling Method |
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107 | (4) |
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1 Introduction of the Technique |
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107 | (1) |
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108 | (1) |
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108 | (2) |
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108 | (1) |
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109 | (1) |
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109 | (1) |
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110 | (1) |
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110 | (1) |
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Magnetic Bead-Based Nucleic Acid Isolation |
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111 | (8) |
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111 | (1) |
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112 | (2) |
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114 | (1) |
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114 | (1) |
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114 | (1) |
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114 | (1) |
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115 | (1) |
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116 | (3) |
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116 | (3) |
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Density Gradient-Based Nucleic Acid Isolation |
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119 | (6) |
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1 Introduction of the Technique |
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119 | (1) |
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120 | (1) |
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121 | (2) |
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121 | (1) |
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121 | (1) |
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122 | (1) |
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123 | (1) |
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123 | (2) |
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123 | (2) |
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DNA Extraction from Agarose Gel Through Paper Strips |
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125 | (10) |
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125 | (1) |
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126 | (1) |
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126 | (4) |
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126 | (1) |
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127 | (1) |
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128 | (2) |
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130 | (1) |
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130 | (5) |
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130 | (5) |
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Part III Major Applications of DNA and RNA |
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Transformation or Genetic Modification of Cells/Organisms |
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135 | (12) |
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135 | (2) |
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2 Natural Method of Genetic Modification |
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137 | (1) |
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3 Genetic Modification in Plants |
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137 | (3) |
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4 Genetic Modification in Animals and Microbes |
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140 | (1) |
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5 Non-targeted Mutagenesis |
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141 | (1) |
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141 | (6) |
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144 | (3) |
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147 | (10) |
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147 | (2) |
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2 Basic Steps of the Technique (Cell-Based DNA Cloning) |
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149 | (1) |
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3 Vector or Cloning Vector |
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150 | (1) |
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4 Types of Cloning Vectors |
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151 | (3) |
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154 | (3) |
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156 | (1) |
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Polymerase Chain Reaction (PCR) |
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157 | (8) |
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157 | (1) |
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158 | (1) |
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159 | (1) |
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160 | (1) |
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5 The Reaction Conditions |
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160 | (2) |
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162 | (1) |
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162 | (1) |
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163 | (2) |
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163 | (2) |
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Southern and Northern Blotting |
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165 | (6) |
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165 | (1) |
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166 | (1) |
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167 | (2) |
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3.1 Restriction Digestion and Gel Electrophoresis |
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167 | (1) |
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167 | (1) |
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168 | (1) |
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168 | (1) |
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169 | (1) |
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169 | (2) |
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169 | (2) |
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171 | (8) |
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171 | (1) |
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2 Difference Between Genome Mapping and DNA Sequencing |
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172 | (1) |
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3 Types of Genome Mapping |
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172 | (1) |
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172 | (2) |
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174 | (5) |
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178 | (1) |
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Applications of DNA Sequencing Technologies for Current Research |
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179 | (13) |
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179 | (1) |
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180 | (1) |
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181 | (1) |
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4 Maxam-Gilbert Sequencing |
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181 | (1) |
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5 Chain-Termination or Dideoxy Method/Sanger Sequencing Principle |
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182 | (1) |
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6 Large-Scale Sequencing and De Novo Sequencing |
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183 | (1) |
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183 | (1) |
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184 | (1) |
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184 | (1) |
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10 High-Throughput Methods |
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185 | (1) |
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11 Long-Read Sequencing Methods: Nanopore Sequencing |
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185 | (1) |
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12 Short-Read Sequencing Methods: 454 Pyrosequencing |
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186 | (1) |
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13 Illumina (Solexa) Sequencing |
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187 | (1) |
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188 | (1) |
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15 Ion Torrent Semiconductor Sequencing |
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188 | (1) |
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188 | (1) |
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17 The Basic Protocol for DNA Sequencing |
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189 | (1) |
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190 | (1) |
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19 Need of DNA Sequencing Technology |
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191 | (1) |
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192 | (1) |
References |
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192 | (5) |
Index |
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197 | |