Preface to third edition |
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xvii | |
Preface to second edition |
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xix | |
Preface to first edition |
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xxi | |
1 Foodborne infections |
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1 | (44) |
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1.1 The microbial world and its relationship to food |
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2 | (4) |
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1.2 Origins of safe food production |
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6 | (1) |
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1.3 Overview of foodborne illness |
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7 | (7) |
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1.4 Public perception of safe food |
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14 | (3) |
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1.5 Causes of foodborne illness |
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17 | (3) |
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1.6 Food poisoning due to common food commodities |
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20 | (2) |
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1.6.1 Milk and milk products |
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20 | (1) |
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20 | (1) |
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20 | (1) |
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1.6.4 Low-water activity (aw) and low-moisture foods |
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21 | (1) |
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22 | (1) |
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23 | (1) |
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1.9 Chronic sequelae following foodborne illness |
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23 | (1) |
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1.10 The size of the foodborne illness problem |
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24 | (12) |
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1.11 The cost of foodborne diseases |
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36 | (2) |
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1.12 Changes in antimicrobial resistance of foodborne pathogens |
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38 | (4) |
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1.12.1 Bacterial antibiotic resistance in agriculture and aquaculture |
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38 | (2) |
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1.12.2 Antibiotics of concern and resistance mechanisms |
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40 | (1) |
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1.12.3 Polymyxin and plasmid-encoded colistin resistance |
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41 | (1) |
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1.12.4 Livestock-associated methicillin-resistant Staphylococcus aureus (LA-MRSA) |
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42 | (1) |
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1.13 Food safety following natural disasters, and conflict |
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42 | (1) |
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1.14 Food microbiology, foodborne diseases and climate change |
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43 | (2) |
2 Basic aspects |
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45 | (40) |
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2.1 The human intestinal tract |
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45 | (1) |
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2.2 The normal human intestinal flora |
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46 | (5) |
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2.3 Host resistance to foodborne infections |
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51 | (1) |
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2.4 Bacterial cell structure |
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52 | (3) |
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52 | (1) |
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2.4.2 Cell membrane structure and the Gram stain |
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52 | (2) |
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2.4.3 Lipopolysaccharide (LPS, O antigen) |
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54 | (1) |
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2.4.4 Flagella (H antigen) |
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55 | (1) |
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2.4.5 Capsule (K and Vi antigen) |
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55 | (1) |
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2.5 Bacterial toxins and other virulence determinants |
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55 | (8) |
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2.5.1 Bacterial endotoxins and exotoxins |
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56 | (4) |
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2.5.2 Pathogenicity islands |
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60 | (2) |
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2.5.3 Bacterial toxins encoded in bacteriophages |
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62 | (1) |
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2.6 Microbial growth cycle |
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63 | (1) |
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63 | (5) |
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63 | (1) |
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2.7.2 Decimal reduction times (D values) and z values |
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64 | (4) |
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2.8 Factors affecting microbial growth |
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68 | (5) |
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2.8.1 Intrinsic and extrinsic factors affecting microbial growth |
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68 | (1) |
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69 | (1) |
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70 | (1) |
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71 | (2) |
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2.8.5 Interplay of factors affecting microbial growth in foods |
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73 | (1) |
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2.9 Microbial response to stress |
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73 | (5) |
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2.9.1 General stress response (GSR) |
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75 | (1) |
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75 | (1) |
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76 | (1) |
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77 | (1) |
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77 | (1) |
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2.10 Predictive modelling |
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78 | (7) |
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2.10.1 Predicting modelling development |
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78 | (1) |
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2.10.2 Primary models and the Gompertz and Baranyi equations |
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79 | (1) |
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80 | (1) |
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81 | (1) |
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2.10.5 Application of predictive microbial modelling |
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82 | (3) |
3 Food preservation and spoilage organisms |
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85 | (50) |
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3.1 Spoilage micro-organisms |
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85 | (6) |
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3.1.1 Spoilage micro-organisms |
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87 | (2) |
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3.1.2 Spoilage of dairy products |
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89 | (1) |
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3.1.3 Spoilage of meat products |
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89 | (1) |
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90 | (1) |
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90 | (1) |
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91 | (1) |
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3.2 Shelf life indicators |
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91 | (2) |
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92 | (1) |
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3.2.2 Gluconic and 2-oxogluconic acid |
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92 | (1) |
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3.2.3 L- and D-lactic acids, acetic acid and ethanol |
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93 | (1) |
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3.2.4 Biologically active amines |
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93 | (1) |
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93 | (1) |
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93 | (1) |
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93 | (1) |
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3.2.8 Predictive modelling |
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93 | (1) |
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3.3 Methods of preservation and shelf life extension |
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93 | (2) |
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95 | (5) |
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96 | (1) |
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3.4.2 Hydrogen peroxide and lactoperoxidase system |
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97 | (1) |
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97 | (1) |
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3.4.4 Non-acidic preservatives |
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98 | (1) |
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3.4.5 Preservation due to weak acids and low pH |
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99 | (1) |
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99 | (1) |
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3.5 Physical methods of preservation |
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100 | (9) |
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3.5.1 Preservation by heat treatment |
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101 | (1) |
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3.5.2 High-pressure treatment |
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102 | (1) |
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3.5.3 Ohmic heating and radio frequency |
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103 | (1) |
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3.5.4 Pulsed electric fields |
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103 | (1) |
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104 | (1) |
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3.5.6 Intense light pulse |
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104 | (1) |
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104 | (4) |
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3.5.8 Cold plasma and low-energy electrons for food surface decontamination |
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108 | (1) |
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109 | (2) |
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3.6.1 Reduced oxygen packaging, modified atmosphere packaging and active packaging |
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109 | (1) |
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3.6.2 Antimicrobial packaging and nanotechnology |
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110 | (1) |
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3.7 Fermented food products |
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111 | (7) |
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3.7.1 Fermented milk products |
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113 | (4) |
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3.7.2 Fermented meat products |
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117 | (1) |
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3.7.3 Fermented vegetables |
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118 | (1) |
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3.7.4 Fermented protein foods: shoyu and miso |
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118 | (1) |
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3.8 Organisms involved in the production of fermented foods |
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118 | (10) |
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3.8.1 Lactic acid bacteria |
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120 | (6) |
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3.8.2 Bifidobacterium species |
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126 | (1) |
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127 | (1) |
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3.9 Functional foods: probiotics and gut modulation |
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128 | (7) |
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3.9.1 Qualified Presumption of Safety (QPS) and Generally Regarded As Safe (GRAS) |
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128 | (1) |
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3.9.2 Functional foods and probiotics |
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129 | (2) |
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131 | (1) |
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3.9.4 Novel organisms - modulation of gut microbiota |
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132 | (3) |
4 Bacterial foodborne pathogens |
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135 | (98) |
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137 | (2) |
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137 | (1) |
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138 | (1) |
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138 | (1) |
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138 | (1) |
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4.2 Campylobacter jejuni, C. coli and C. lari |
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139 | (9) |
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4.2.1 General description |
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139 | (1) |
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4.2.2 Campylobacter infections |
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140 | (1) |
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4.2.3 Campylobacter jejuni typing |
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141 | (1) |
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142 | (3) |
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4.2.5 Whole-genome sequence analysis |
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145 | (2) |
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4.2.6 Sources and control of Campylobacter jejuni |
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147 | (1) |
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148 | (12) |
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4.3.1 General description |
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148 | (2) |
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4.3.2 Salmonella serotypes |
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150 | (2) |
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4.3.3 Infections caused by Salmonella serovars |
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152 | (2) |
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4.3.4 Virulence factors of Salmonella serovars |
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154 | (1) |
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4.3.5 Whole-genome analysis |
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155 | (1) |
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4.3.6 Sources and control of Salmonella serovars |
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156 | (1) |
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4.3.7 Salmonella serovar outbreaks |
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157 | (3) |
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160 | (16) |
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4.4.1 General description |
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160 | (1) |
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161 | (2) |
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4.4.3 Infections caused by E. coli pathovars |
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163 | (5) |
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168 | (1) |
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4.4.5 Whole-genome analysis |
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169 | (1) |
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4.4.6 Sources and control of E. coli pathovars |
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170 | (2) |
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4.4.7 Outbreaks caused by E. coli pathovars |
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172 | (4) |
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4.5 Sh. dysenteriae and Sh. sonnei |
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176 | (2) |
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4.5.1 General description |
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176 | (1) |
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177 | (1) |
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177 | (1) |
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4.5.4 Sh. sonnei outbreak |
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178 | (1) |
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178 | (6) |
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4.6.1 General description |
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178 | (1) |
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4.6.2 Infections due to Cronobacter species |
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179 | (1) |
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4.6.3 Identification and typing methods for Cronobacter species |
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180 | (1) |
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181 | (1) |
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4.6.5 Sources and control of Cronobacter species |
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182 | (1) |
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4.6.6 Cronobacter outbreaks |
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183 | (1) |
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4.7 Vibrio cholerae, V parahaemolyticus and V vulnificus |
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184 | (4) |
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4.7.1 General description |
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184 | (1) |
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4.7.2 Infections due to Vibrio species |
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184 | (2) |
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186 | (1) |
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4.7.4 Sources and control |
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187 | (1) |
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4.8 Brucella melitensis, Br. abortus and Br. suis |
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188 | (1) |
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4.8.1 General description |
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188 | (1) |
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188 | (1) |
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4.9 Yersinia enterocolitica |
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189 | (2) |
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4.9.1 General description |
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189 | (1) |
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189 | (1) |
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4.9.3 Sources and control |
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190 | (1) |
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4.9.4 Outbreaks due to Y enterocolitica |
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190 | (1) |
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4.10 Aeromonas hydrophila, A. caviae and A. sobria |
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191 | (2) |
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4.10.1 General description |
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191 | (1) |
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4.10.2 A. hydrophila gastroenteritis |
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192 | (1) |
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4.10.3 Sources and control |
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192 | (1) |
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4.11 Plesiomonas shigelloides |
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193 | (1) |
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4.11.1 General description |
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193 | (1) |
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4.11.2 Plesiomonas infections |
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193 | (1) |
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4.11.3 Sources and control |
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193 | (1) |
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4.12 Listeria monocytogenes |
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194 | (13) |
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4.12.1 General description |
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194 | (1) |
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195 | (1) |
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4.12.3 Lineages and typing L. monocytogenes |
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196 | (2) |
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198 | (2) |
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4.12.5 Whole-genome analysis of L. monocytogenes |
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200 | (1) |
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4.12.6 Sources and control of L. monocytogenes |
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201 | (2) |
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4.12.7 L. monocytogenes outbreaks |
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203 | (4) |
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4.13 Staphylococcus aureus |
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207 | (3) |
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4.13.1 General description |
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207 | (1) |
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4.13.2 Infections associated with St. aureus |
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207 | (1) |
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208 | (1) |
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4.13.4 Sources and control |
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209 | (1) |
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4.14 Clostridium perfringens |
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210 | (1) |
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4.14.1 General description |
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210 | (1) |
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4.14.2 Cl. perfringens infections |
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210 | (1) |
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4.14.3 Sources and control |
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211 | (1) |
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4.15 Clostridium botulinum |
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211 | (2) |
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4.15.1 General description |
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211 | (1) |
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4.15.2 Cl. botulinum intoxication |
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212 | (1) |
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4.15.3 Sources and control |
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212 | (1) |
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213 | (4) |
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4.16.1 General description |
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213 | (1) |
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4.16.2 B. cereus foodborne infections |
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214 | (1) |
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215 | (1) |
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4.16.4 Sources and control |
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216 | (1) |
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4.17 Enterococcus and Streptococcus species |
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217 | (2) |
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4.17.1 General description |
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217 | (1) |
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4.17.2 E. faecalis and E. faecium |
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217 | (1) |
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4.17.3 Streptococcus pyogenes, group A streptococci |
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218 | (1) |
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218 | (1) |
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4.18 Emerging and uncommon foodborne pathogens |
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219 | (14) |
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221 | (2) |
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4.18.2 Campylobacter concisus |
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223 | (1) |
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4.18.3 EAEC, E. coli O55 and E. coli O26 |
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223 | (3) |
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4.18.4 Escherichia albertii |
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226 | (2) |
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4.18.5 Providencia akalifaciens |
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228 | (1) |
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4.18.6 Clostridium difficile |
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228 | (2) |
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4.18.7 Mycobacterium paratuberculosis |
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230 | (1) |
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4.18.8 Acinetobacter species |
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231 | (1) |
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231 | (2) |
5 Foodborne pathogens: viruses, toxins, parasites and prions |
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233 | (26) |
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233 | (11) |
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235 | (4) |
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239 | (2) |
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241 | (1) |
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242 | (1) |
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5.1.5 Small round viruses, astroviruses, sapporo-like viruses, adenoviruses and parvoviruses |
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243 | (1) |
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5.1.6 Human enteroviruses |
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244 | (1) |
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5.2 Seafood and shellfish poisoning |
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244 | (4) |
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5.2.1 Ciguatera poisoning |
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245 | (1) |
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5.2.2 Scombroid poisoning |
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246 | (1) |
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5.2.3 Paralytic shellfish poisoning |
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246 | (1) |
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5.2.4 Diarrhoeic shellfish poisoning |
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246 | (1) |
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5.2.5 Neurotoxic shellfish poisoning |
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246 | (1) |
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5.2.6 Amnesic shellfish poisoning |
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247 | (1) |
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5.3 Foodborne parasites: eucaryotes |
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248 | (5) |
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249 | (1) |
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5.3.2 Taenia saginata and T solium |
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249 | (1) |
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5.3.3 Echinococcus multilocularis and E. granulosus |
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250 | (1) |
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5.3.4 Cyclospora cayetanensis |
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250 | (1) |
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5.3.5 Cryptosporidium parvum |
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251 | (1) |
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252 | (1) |
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5.3.7 Trichinella spiralis |
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252 | (1) |
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253 | (6) |
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255 | (1) |
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256 | (1) |
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256 | (1) |
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256 | (1) |
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256 | (1) |
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5.4.6 Prions and transmissible spongiform encephalopathies |
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257 | (2) |
6 Methods of detection and characterisation |
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259 | (54) |
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259 | (5) |
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264 | (5) |
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265 | (2) |
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6.2.2 Sublethally injured cells |
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267 | (1) |
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6.2.3 Viable but non-culturable bacteria (VBNC) |
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268 | (1) |
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6.3 Rapid sampling methods |
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269 | (4) |
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269 | (1) |
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6.3.2 Separation and concentration of target |
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269 | (4) |
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6.4 Rapid end-detection methods |
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273 | (6) |
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6.4.1 ELISA and antibody-based detection systems |
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273 | (1) |
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6.4.2 Reversed passive latex agglutination |
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274 | (1) |
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6.4.3 ATP bioluminescence techniques and hygiene monitoring |
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275 | (1) |
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276 | (1) |
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276 | (1) |
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276 | (2) |
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6.4.7 Impedance (Conductance) microbiology |
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278 | (1) |
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6.5 DNA-based molecular typing and proteomic methods |
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279 | (9) |
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6.5.1 Polymerase chain reaction (PCR) |
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280 | (2) |
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282 | (1) |
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6.5.3 Loop-mediated isothermal amplification (LAMP) technique |
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283 | (1) |
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6.5.4 Pulsed-field gel electrophoresis (PFGE) |
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284 | (1) |
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6.5.5 Restriction fragment length polymorphism (RFLP) |
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285 | (1) |
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6.5.6 Amplified fragment length polymorphism (AFLP) |
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285 | (1) |
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6.5.7 Random amplification of polymorphic DNA (RAPD) |
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285 | (1) |
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6.5.8 Repetitive-element polymerase chain reaction (Rep-PCR) |
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285 | (1) |
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6.5.9 Nucleic acid sequence-based amplification (NASBA) |
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286 | (1) |
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6.5.10 Multiple-locus variable number tandem (VNTR) repeat analysis |
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286 | (1) |
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6.5.11 PCR-probe based serotyping |
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287 | (1) |
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287 | (1) |
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6.5.13 Matrix-associated laser desorption ionisation - time of flight (MALDI-TOF) |
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287 | (1) |
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6.6 Identification and typing methods based on high-throughput DNA sequencing |
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288 | (4) |
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6.6.1 Conventional seven-loci MLST |
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288 | (1) |
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6.6.2 Genome sequence-based MLST |
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289 | (1) |
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6.6.3 CRISPR-cas array typing |
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290 | (1) |
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6.6.4 Single nucleotide polymorphism (SNP)-based analysis |
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291 | (1) |
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6.7 Specific detection procedures and accreditation |
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292 | (21) |
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6.7.1 Aerobic plate count (APC) |
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292 | (1) |
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6.7.2 Salmonella serovars |
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292 | (5) |
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6.7.3 Campylobacter species |
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297 | (2) |
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6.7.4 Enterobacteriaceae and E. coli |
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299 | (1) |
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6.7.5 Pathogenic E. coli, including E. coli 0157:H7 |
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300 | (1) |
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301 | (1) |
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302 | (2) |
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304 | (1) |
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304 | (1) |
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6.7.10 Listeria monocytogenes |
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305 | (3) |
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6.7.11 Staphylococcus aureus |
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308 | (1) |
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6.7.12 Clostridium perfringens |
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308 | (1) |
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6.7.13 B. cereus, B. subtilis and B. licheniformis |
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309 | (1) |
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310 | (1) |
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310 | (3) |
7 Microbiological criteria |
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313 | (24) |
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7.1 Background to microbiological criteria and end-product testing |
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313 | (1) |
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7.2 International commission on microbiological specifications for foods (ICMSF) |
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313 | (1) |
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7.3 Codex Alimentarius principles for the establishment and application of microbiological criteria |
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314 | (2) |
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316 | (2) |
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318 | (3) |
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7.6 Attributes sampling plan |
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321 | (1) |
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322 | (1) |
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322 | (1) |
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322 | (7) |
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7.7.1 Defining a 'lot' of food |
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322 | (1) |
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323 | (1) |
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7.7.3 Operating characteristic curve |
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323 | (1) |
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7.7.4 Producer risk and consumer risk |
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324 | (1) |
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7.7.5 Stringency of two- and three-class plans, setting n and c |
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324 | (3) |
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7.7.6 Setting the values for m and M |
|
|
327 | (2) |
|
7.8 Microbiological limits |
|
|
329 | (4) |
|
|
329 | (1) |
|
7.8.2 Limitations of microbiological testing |
|
|
329 | (1) |
|
7.8.3 Examples of sampling plans |
|
|
329 | (4) |
|
7.9 Implemented microbiological criteria |
|
|
333 | (1) |
|
7.9.1 Microbiological criteria in the European Union |
|
|
333 | (1) |
|
7.9.2 EU Directives specifying microbiological standards for foods |
|
|
333 | (1) |
|
7.10 UK guidelines for ready-to-eat foods |
|
|
333 | (4) |
8 Hygienic production practices |
|
337 | (14) |
|
8.1 Contribution of food handlers to foodborne illness |
|
|
337 | (1) |
|
8.2 Personnel hygiene and training |
|
|
337 | (3) |
|
|
340 | (3) |
|
8.4 Detergents and disinfectants |
|
|
343 | (1) |
|
|
343 | (5) |
|
8.5.1 Microbial biofilm formation |
|
|
343 | (3) |
|
8.5.2 Bacterial biofilm induction |
|
|
346 | (1) |
|
8.5.3 Biofilm removal and control |
|
|
346 | (2) |
|
8.6 Assessment of cleaning and disinfection efficiency |
|
|
348 | (3) |
9 Food safety management tools |
|
351 | (34) |
|
9.1 The manufacture of hygienic food |
|
|
351 | (6) |
|
9.2 Microbiological safety of food in world trade |
|
|
357 | (1) |
|
9.3 Consumer pressure effect on food processing |
|
|
358 | (1) |
|
9.4 The management of hazards in food in international trade |
|
|
359 | (1) |
|
9.5 Hazard analysis critical control point (HACCP) |
|
|
359 | (1) |
|
9.6 Prerequisite programme |
|
|
360 | (3) |
|
|
363 | (4) |
|
|
363 | (1) |
|
9.7.2 Preparation for HACCP |
|
|
363 | (1) |
|
9.7.3 Principle 1: hazard analysis (HA) |
|
|
364 | (1) |
|
9.7.4 Principle 2: critical control points (CCPs) |
|
|
364 | (2) |
|
9.7.5 Principle 3: critical limits |
|
|
366 | (1) |
|
9.7.6 Principle 4: CCP monitoring |
|
|
366 | (1) |
|
9.7.7 Principle 5: corrective actions |
|
|
366 | (1) |
|
9.7.8 Principle 6: verification |
|
|
366 | (1) |
|
9.7.9 Principle 7: record keeping |
|
|
367 | (1) |
|
9.8 Microbiological criteria and HACCP |
|
|
367 | (2) |
|
9.9 Microbiological hazards and their control |
|
|
369 | (2) |
|
9.9.1 Sources of microbiological hazards |
|
|
369 | (1) |
|
9.9.2 Temperature control of microbiological hazards |
|
|
370 | (1) |
|
9.9.3 Non-temperature control of microbiological hazards |
|
|
371 | (1) |
|
|
371 | (11) |
|
9.10.1 Production of pasteurised milk |
|
|
371 | (1) |
|
9.10.2 Swine slaughter in the abattoir |
|
|
372 | (1) |
|
9.10.3 Chilled food manufacture |
|
|
373 | (3) |
|
|
376 | (6) |
|
|
382 | (1) |
|
|
382 | (1) |
|
9.13 Total quality management |
|
|
382 | (3) |
10 Microbiological risk assessment |
|
385 | (40) |
|
10.1 Risk analysis and microbiological risk assessment |
|
|
385 | (2) |
|
|
387 | (2) |
|
|
389 | (3) |
|
|
392 | (3) |
|
|
393 | (1) |
|
|
394 | (1) |
|
10.4.3 Risk communication |
|
|
395 | (1) |
|
|
395 | (20) |
|
10.5.1 Statement of purpose |
|
|
396 | (1) |
|
10.5.2 Hazard identification |
|
|
396 | (1) |
|
10.5.3 Exposure assessment |
|
|
396 | (5) |
|
10.5.4 Hazard characterisation |
|
|
401 | (2) |
|
10.5.5 Dose-response assessment |
|
|
403 | (2) |
|
10.5.6 Dose-response models |
|
|
405 | (4) |
|
10.5.7 Dose and infection |
|
|
409 | (4) |
|
10.5.8 Risk characterisation |
|
|
413 | (1) |
|
10.5.9 Production of a formal report |
|
|
414 | (1) |
|
10.5.10 Triangular distributions and Monte Carlo simulation |
|
|
414 | (1) |
|
|
415 | (4) |
|
10.6.1 Risk assessment policy |
|
|
419 | (1) |
|
|
419 | (1) |
|
10.7 Food safety objectives (FSO) |
|
|
419 | (2) |
|
|
421 | (1) |
|
10.9 Future developments in MRA |
|
|
422 | (3) |
|
10.9.1 International methodology and guidelines |
|
|
422 | (1) |
|
10.9.2 Risk assessment database |
|
|
423 | (1) |
|
10.9.3 Training courses and use of resources |
|
|
424 | (1) |
11 Application of microbiological risk assessment |
|
425 | (34) |
|
|
425 | (10) |
|
11.1.1 Salmonella enteritidis in shell eggs and egg products |
|
|
425 | (3) |
|
11.1.2 Hazard identification and hazard characterisation of Salmonella in broilers and eggs |
|
|
428 | (2) |
|
11.1.3 Exposure assessment of Salmonella serovars in broilers |
|
|
430 | (2) |
|
11.1.4 Salmonella serovars in cooked chicken |
|
|
432 | (1) |
|
11.1.5 Salmonella serovars in cooked patty |
|
|
433 | (1) |
|
|
434 | (1) |
|
11.1.7 Domestic and sporadic human salmonellosis |
|
|
435 | (1) |
|
|
435 | (7) |
|
11.2.1 C. jejuni risk from fresh chicken |
|
|
435 | (2) |
|
11.2.2 Risk profile for pathogenic species of Campylobacter in Denmark |
|
|
437 | (1) |
|
11.2.3 Risk assessment of C. jejuni in broilers |
|
|
438 | (1) |
|
11.2.4 Campylobacter fluoroquinolone resistance |
|
|
438 | (4) |
|
|
442 | (7) |
|
11.3.1 L. monocytogenes hazard identification and hazard characterisation in ready-to-eat foods |
|
|
442 | (2) |
|
11.3.2 L. monocytogenes exposure assessment in RTE foods |
|
|
444 | (2) |
|
11.3.3 Relative risk of L. monocytogenes in selected RTE foods |
|
|
446 | (1) |
|
11.3.4 L. monocytogenes in European Union trade |
|
|
446 | (1) |
|
11.3.5 L. monocytogenes in meat balls |
|
|
447 | (2) |
|
11.3.6 Listeriosis from RTE meat products |
|
|
449 | (1) |
|
|
449 | (2) |
|
11.4.1 E. coli 0157:H7 in ground beef |
|
|
449 | (2) |
|
|
451 | (2) |
|
11.5.1 B. cereus risk assessment |
|
|
451 | (2) |
|
11.6 Vibrio parahaemolyticus |
|
|
453 | (2) |
|
11.6.1 Public health impact of V parahaemolyticus in raw molluscan shellfish |
|
|
453 | (2) |
|
11.7 Cronobacter species and Salmonella in powdered infant formula (PIF) |
|
|
455 | (2) |
|
11.8 Viral risk assessments |
|
|
457 | (2) |
|
11.8.1 Viral contamination of shellfish and coastal waters |
|
|
457 | (2) |
12 International control of microbiological hazards in foods: regulations and authorities |
|
459 | (16) |
|
12.1 Control of foodborne pathogens |
|
|
459 | (5) |
|
12.1.1 Control of Salmonella serovars in poultry |
|
|
459 | (2) |
|
12.1.2 Control of Escherichia coli pathovars and Salmonella serovars in fresh produce |
|
|
461 | (1) |
|
12.1.3 Control of pathogens in low-moisture foods (LMFs) |
|
|
462 | (2) |
|
12.2 World Health Organisation (WHO), global food security from accidental and deliberate contamination |
|
|
464 | (3) |
|
12.3 Regulations in international trade of food |
|
|
467 | (1) |
|
12.4 Codex Alimentarius Commission (CAC) |
|
|
468 | (1) |
|
12.5 SPS measures, Technical Barriers to Trade (TBT) and the WHO |
|
|
469 | (1) |
|
|
470 | (1) |
|
12.7 International food safety agencies |
|
|
471 | (4) |
|
12.7.1 European Food Safety Authority (EFSA) |
|
|
472 | (1) |
|
12.7.2 Food authorities in the United States |
|
|
472 | (3) |
13 Surveillance and foodborne outbreak investigation |
|
475 | (24) |
|
13.1 Surveillance programmes |
|
|
475 | (8) |
|
13.1.1 International Food Safety Authorities Network (IFSAN) |
|
|
476 | (1) |
|
13.1.2 Surveillance systems in the United States |
|
|
476 | (2) |
|
13.1.3 PulseNet international |
|
|
478 | (1) |
|
13.1.4 European Centre for Disease Prevention and Control (ECDC) and European surveillance for salmonellosis and shiga toxin-producing E. coli (STEC) |
|
|
479 | (1) |
|
13.1.5 European Food-Borne Viruses in Europe network (FBVE) |
|
|
480 | (1) |
|
13.1.6 Rapid Alert System for Food and Feed (RASFF) |
|
|
480 | (3) |
|
13.1.7 Global Salm-Sury (GSS) |
|
|
483 | (1) |
|
13.1.8 Surveillance of ready-to-eat foods in the United Kingdom |
|
|
483 | (1) |
|
13.2 Outbreak investigations |
|
|
483 | (9) |
|
13.2.1 Preliminary outbreak investigation |
|
|
486 | (1) |
|
13.2.2 Case definition and data collection |
|
|
486 | (1) |
|
13.2.3 Data collation and interpretation |
|
|
487 | (5) |
|
13.3 Social media, crowd sourcing and reporting food poisoning cases |
|
|
492 | (1) |
|
13.4 Mobile phones and food safety |
|
|
493 | (1) |
|
13.5 Food terrorism and biocrimes |
|
|
493 | (6) |
14 Whole-genome sequencing, microbiomes and genomic epidemiology |
|
499 | (16) |
|
14.1 High-throughput DNA sequencing |
|
|
499 | (2) |
|
|
501 | (2) |
|
14.3 Genomic epidemiology |
|
|
503 | (2) |
|
14.3.1 Whole-genome sequencing for microbial source tracking |
|
|
503 | (2) |
|
14.3.2 Genome Trakr network (US) |
|
|
505 | (1) |
|
14.3.3 NCBI pathogen detection site |
|
|
505 | (1) |
|
14.3.4 Center for Genomic Epidemiology (Denmark) |
|
|
505 | (1) |
|
14.4 Key outbreaks investigated using genomic epidemiology |
|
|
505 | (10) |
|
14.4.1 Ready-to-eat meat products L. monocytogenes outbreak, Canada, 2008 |
|
|
505 | (2011001) |
|
14.4.2 E. coli O104:H4 outbreak, Germany, |
|
|
2011506 | |
|
14.4.3 C. jejuni outbreak investigations |
|
|
508 | (1) |
|
14.4.4 Salmonella enteritidis in eggs, European outbreak, 2014 |
|
|
509 | (1) |
|
14.4.5 Multinational outbreak of Salmonella Agona through infant formula contamination, 2017 |
|
|
510 | (2) |
|
14.4.6 Retrospective Cronobacter sakazakii neonatal intensive care unit outbreak, France, 1994 |
|
|
512 | (1) |
|
14.4.7 L. monocytogenes ST6, polony sausages, South Africa, 2017-2018 |
|
|
512 | (3) |
Glossary of terms |
|
515 | (6) |
List of abbreviations |
|
521 | (4) |
Food safety resources on the world wide web |
|
525 | (6) |
Plates and credits |
|
531 | (2) |
References |
|
533 | (30) |
Index |
|
563 | |