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E-grāmata: New Chemistry And New Opportunities From The Expanding Protein Universe - Proceedings Of The 23rd International Solvay Conference On Chemistry

Edited by (The Scripps Research Inst, Usa), Edited by (Univ Libre De Bruxelles, Belgium), Edited by (The Scripps Research Inst, Usa), Edited by (Eth Zurich, Switzerland), Edited by (The Scripps Research Inst, Usa & Eth Zurich, Switzerland)
  • Formāts: 380 pages
  • Izdošanas datums: 10-Nov-2014
  • Izdevniecība: World Scientific Publishing Co Pte Ltd
  • Valoda: eng
  • ISBN-13: 9789814603843
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  • Formāts: 380 pages
  • Izdošanas datums: 10-Nov-2014
  • Izdevniecība: World Scientific Publishing Co Pte Ltd
  • Valoda: eng
  • ISBN-13: 9789814603843
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A select group of 40 eminent scientists from all parts of the world met to consider the current state of chemical and biological knowledge on the ever-expanding protein universe, and to discuss emerging opportunities for the foreseeable future. Scientific approaches to discover, characterize, and regulate protein functions were discussed over a range of disciplines, including natural product chemistry, microbiology, enzymology, biochemistry, structural biology, chemical biology, and glycobiology. Some notable highlights included discovery of new enzymatic pathways, innovative carbohydrate chemistry, design of proteins containing unnatural amino acids, structural elucidation of complex supramolecular machines, and design and application of small molecule drugs, biologics and biosimilars.This fascinating compendium of scientific presentations and in-depth discussions affords a unique perspective on today's protein chemistry and biology as well as on the challenges for tomorrow.
I The International Solvay Institutes xi
II Solvay Scientific Committee for Chemistry xiii
III Acknowledgements xv
IV Participants xvi
V Auditors xviii
VI Opening Address xix
Professor M. Henneaux
VII Preface xxi
K. Wiithrich
Session 1 New Chemistry in the Expanding Protein Universe
1(56)
1.1 Novel Chemistry Still to be Found in Nature
3(3)
C. T. Walsh
1.2 Natural Product Biosynthesis in the Genomic Age
6(5)
W. A. van der Donk
1.3 Peptide Dendrimers and Polycyclic Peptides
11(5)
J.-L. Reymond
1.4 What can Comparative Genomics Reveal about the Mechanisms of Protein Function Evolution?
16(4)
N. L. Dawson
R. Studer
N. Furnham
D. Lees
S. Das
J. Thornton
C. Orengo
1.5 Exploring Chromatin Biology Using Protein Chemistry
20(3)
T. W. Muir
1.6 Our Expanding Protein Universe
23(5)
A. Godzik
1.7 The Scientific Impact of Freely Available Chemical Probes
28(3)
A. M. Edwards
1.8 Discussions of Session 1
31(26)
Session 2 Exploring Enzyme Families and Enzyme Catalysis
57(60)
2.1 Mechanistic Enzymology and Catalyst Design
59(5)
D. Hilvert
2.2 Looking in New Directions for the Origins of Enzymatic Rate Accelerations
64(6)
J. P. Klinman
2.3 Computational Enzyme Design and Methods to Predict the Role of Remote Mutations
70(5)
K. N. Houk
2.4 Discovering Novel Enzymes, Metabolites and Pathways
75(4)
J. A. Gerlt
2.5 Programming New Chemistry into the Genetic Code of Cells and Animals
79(5)
J. W. Chin
2.6 Expanding the Enzyme Universe through a Marriage of Chemistry and Evolution
84(6)
F. H. Arnold
2.7 Controlled Radical Reactions in Biology and the Importance of Metallo-Cofactor Biosynthesis
90(4)
J. Stubbe
2.8 Discussions of Session 2
94(23)
Session 3 Microbiomes and Carbohydrate Chemistry
117(60)
3.1 Structural Basis for Host/Commensal-Microbe Interactions in the Human Distal Gut Microbiome
119(6)
I. A. Wilson
3.2 Carbohydrate Chemistry and Biology
125(5)
C.-H. Wong
3.3 Chemical Biological Proteomics of Bacterial Protein Functionalities in the Human Distal Gut Microbiome
130(6)
D. W. Wolan
3.4 Automated Oligosaccharide Synthesis: From Insights into Fundamental Glycobiology to Vaccines and Diagnostics
136(5)
P. H. Seeberger
3.5 Carbohydrate-Active Enzymes in Microbiomes
141(5)
B. Henrissat
3.6 The Microbiome(s): Microbiota, Families, Functions
146(4)
A. Godzik
3.7 N-Linked Protein Glycosylation
150(4)
M. Aebi
3.8 Discussions of Session 3
154(23)
Session 4 GPCRs and Transporters: Ligands, Cofactors, Drug Development
177(52)
4.1 GPCRs and Transporters: Ligands, Cofactors, Drug Development
179(3)
G. von Heijne
4.2 Studies of GPCR Conformations in Non-Crystalline Milieus
182(4)
K. Wuthrich
4.3 The Seven Transmembrane Superfamily
186(6)
R. C. Stevens
4.4 Nanobodies for the Structural and Functional Investigation of GPCR Transmembrane Signaling
192(3)
E. Pardon
J. Steyaert
4.5 The Hidden Pharmacology of the Human GPCR-ome
195(4)
B. L. Roth
4.6 Structures and Reaction Mechanisms of ABC Transporters
199(4)
K. Locher
4.7 Discussions of Session 4
203(26)
Session 5 Biologicals and Biosimilars
229(56)
5.1 Biologicals and Biosimilars
231(6)
S. Ghose
M. G. Grutter
5.2 Platform Technologies for the Artificial Pseudo-Natural Product Discovery
237(6)
H. Suga
5.3 Anticalins® & Pasylation®: New Concepts for Biopharmaceutical Drug Development from Protein Design
243(6)
A. Skerra
5.4 From Natural Antibodies to Synthetic Proteins
249(5)
S. S. Sidhu
5.5 From Intact Antibodies to Armed Antibodies
254(3)
D. Neri
5.6 Regulating Cellular Life Death and Development Using Intracellular Combinatorial Antibody Libraries
257(3)
R. Lerner
J. Xie
H. Zhang
K. Yea
J. Blanchard
K. Baldwin
5.7 Nanobodies: A Universe of Variable Domains and a Toolbox for Many Trades
260(6)
L. Wyns
5.8 Discussions of Session 5
266(19)
Session 6 Proteins in Supramolecular Machines
285(60)
6.1 Assembly of Filamentous Type 1 Pili from Uropathogenic Escherichia Coli Strains
287(6)
R. Glockshuber
6.2 HIV Envelope and Influenza Hemagglutinin Fusion Glycoproteins and the Quest for a Universal Vaccine
293(6)
I. A. Wilson
6.3 Deconstruction of Iterative Polyketide Synthases
299(6)
C. A. Townsend
6.4 Regulating Ribosome Pausing During Translation
305(3)
M. V. Rodnina
6.5 The Molecular Mechanics of the Ribosome
308(5)
J. Zhou
L. Lancaster
Z. Guo
J. P. Donohue
H. F. Noller
6.6 Exploring the Dynamics of Supramolecular Machines with Cryo-Electron Microscopy
313(5)
J. Frank
6.7 Crystallographic Studies of Eukaryotic Ribosomes and Functional Insights
318(5)
N. Ban
6.8 Discussions of Session 6
323(22)
Index 345