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Nucleic Acid Structure and Recognition [Mīkstie vāki]

(The Institute of Cancer Research (University of London))
  • Formāts: Paperback / softback, 202 pages, height x width x depth: 239x169x12 mm, weight: 369 g, numerous line drawings, 4 halftones
  • Izdošanas datums: 30-May-2002
  • Izdevniecība: Oxford University Press
  • ISBN-10: 019850635X
  • ISBN-13: 9780198506355
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  • Mīkstie vāki
  • Cena: 182,88 €*
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  • Formāts: Paperback / softback, 202 pages, height x width x depth: 239x169x12 mm, weight: 369 g, numerous line drawings, 4 halftones
  • Izdošanas datums: 30-May-2002
  • Izdevniecība: Oxford University Press
  • ISBN-10: 019850635X
  • ISBN-13: 9780198506355
Citas grāmatas par šo tēmu:
This book provides a detailed view of the molecular structures of DNA and RNA and how they are recognised by small molecules and proteins. Extensive source material is provided, including information on relevant web sites and computer programmes. The major methods of structural investigation for nucleic acids: X-ray crystallography, NMR, and molecular modelling are reviewed and their scope and limitations (in the context of nucleic acids) discussed. Also covered are the conformational features of nucleic acid building blocks, including a description of how base-pair morphologies are analysed; the structures of DNA double helices and helical oligonucleotides, emphasising current ideas on sequence-dependent structure; and DNA-DNA interactions, including triplexes and quadruplexes. The principles of RNA folding, ribosome, and ribozyme structure are also surveyed. Both covalent and non-covalent nucleic acid interactions with small molecules are described, with the emphasis on recognition principles and sequence specific gene recognition. The principles of protein - nucleic acid are covered, focussing on regulatory proteins.

Nucleic Acid Structure and Recognition will therefore equip readers with a good understanding of all the important aspects of this major field.

The Nucleic Acid Database (NDB) crystallographic and NMR structures for the nucleic acid structures described in the book are freely available through the Nucleic Acid Structure and Recognition website.

Recenzijas

This excellent book could hardly have been more timely * Chemistry in Britain * ... this book includes a short and readable description, and the webpage gives quick access to the ribosome coordinate files for an awesome molecular experience ... let me congratulate Steve on making this subject so accessible to such a potentially wide audience. * Crystallography News *

How to use this book and its web site xiii
Methods for studying nucleic acid structure
1(16)
Introduction
1(1)
X-ray diffraction methods for structural analysis
2(8)
NMR methods for studying nucleic acid structure and dynamics
10(1)
Molecular modelling and simulation of nucleic acids
11(2)
Chemical and enzymatic probes of structure
13(1)
Sources of structural data
14(3)
Further reading
14(1)
Some useful internet sites
15(2)
The building-blocks of DNA and RNA
17(14)
Introduction
17(2)
Base pairing
19(1)
Base and base pair flexibility
20(3)
Sugar puckers
23(3)
Conformations about the glycosidic blood
26(1)
The backbone torsion angles and correlated flexibility
27(4)
References
30(1)
Further reading
30(1)
DNA structure as observed in fibres and crystals
31(31)
Structural fundamentals
31(1)
Polynucleotide structures from fibre diffraction studies
32(6)
B-DNA oligonucleotide structure as seen in crystallographic analyses
38(9)
A-DNA oligonucleotide crystal structures
47(3)
Z-DNA-left-handed DNA
50(4)
Bent DNA
54(3)
Concluding remarks
57(5)
References
57(3)
Further reading
60(2)
DNA-DNA recognition: non-standard and higher order DNA structures
62(27)
Mismatches in DNA
62(5)
DNA triple helices
67(9)
Guanine quadruplexes
76(5)
DNA junctions
81(8)
References
85(2)
Further reading
87(2)
Principles of small molecule-DNA recognition
89(50)
Introduction
89(4)
DNA-water interactions
93(6)
General features of DNA-drug and small-molecule recognition
99(1)
Intercalative binding
100(13)
Intercalative-type binding to higher order DNAs
113(2)
Groove binding molecules
115(13)
Covalent bonding
128(11)
References
134(3)
Further reading
137(2)
The RNA structural world
139(23)
Introduction
139(1)
Fundamentals of RNA structure
140(7)
Transfer RNA Structures
147(3)
Ribozymes
150(4)
The ribosome, a ribozyme machine
154(4)
RNA motifs
158(4)
References
159(2)
Further reading
161(2)
Web sites of interest
163
Principles of protein-DNA recognition
162(20)
Introduction
162(2)
Direct protein-DNA contacts
164(4)
Major-groove interactions-the a-helix as the recognition element
168(2)
Zinc-finger recognition modes
170(2)
Other major-groove recognition motifs
172(1)
Minor-groove recognition
173(6)
DNA bending and protein recognition
179(3)
References
180(2)
Further reading
182(1)
Useful web sites 182(1)
Index 183