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E-grāmata: Phylonyms: A Companion to the PhyloCode

Edited by (Smithsonian Institution, Washington, DC, USA), Edited by (Dept. of Environmental and Plant Biology, Ohio University, USA), Edited by (Yale University, Connecticut, USA)
  • Formāts: 1352 pages
  • Izdošanas datums: 30-Apr-2020
  • Izdevniecība: CRC Press
  • ISBN-13: 9780429821219
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  • Formāts: 1352 pages
  • Izdošanas datums: 30-Apr-2020
  • Izdevniecība: CRC Press
  • ISBN-13: 9780429821219
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"Nearly 300 clades - lineages of organisms - will be defined by reference to hypotheses of phylogenetic history rather than by taxonomic ranks and types. This volume will document the Real World uses of PhyloCode and will govern and apply to the names of clades, while species names will still be governed by traditional codes"--

Phylonyms is an implementation of the PhyloCode, which is a set of principles, rules, and recommendations governing phylogenetic nomenclature – a system for naming taxa by explicit reference to phylogeny. In contrast, the current botanical, zoological, and bacteriological codes name taxa by reference to taxonomic ranks (e.g., family, genus) and types. This volume includes nearly 300 clades/accounts, drafted by experts, and establishes nomenclatural precedence for many PhyloCode-based names. Phylonyms is meant to provide a foundation for the future use of a naming system grounded in explicit phylogenetic hypotheses.

Key Features

  • Provides clear definitions of the names of nearly 300 clades
  • Each clade name/account is expressly based on a phylogenetic hypothesis
  • Includes numerous examples of the implementation of the PhyloCode
  • Eliminates the reliance on taxonomic ranks in favor of phylogenetic relationships

Related Titles:
Rieppel, O. Phylogenetic Systematics: Haeckel to Hennig (ISBN 978-1-4987-5488-0)
de Queiroz, K., and P. D. Cantino. PhyloCode: A Phylogenetic Code of Biological Nomenclature (ISBN 978-1-1383-3286-7).

Acknowledgments xiii
Introduction xv
SECTION 1
Pan-Biota
3(10)
Biota
13(16)
Eukarya
29(4)
Metamonada
33(6)
Discoba
39(4)
Discicristata
43(4)
Euglenozoa
47(4)
Sar
51(4)
Stramenopila
55(6)
Rhizaria
61(6)
Foraminifera
67(18)
Alveolata
85(6)
Ciliophora
91(2)
Postciliodesmatophora
93(2)
Intramacronucleata
95(2)
Archaeplastida [ see Section 2] Amorphea
97(6)
Opisthokonta
103(6)
Fungi
109(6)
Dikarya
115(4)
Basidiomycota
119(4)
Ascomycota
123(6)
Metazoa [ see Section 5]
SECTION 2
Archaeplastida
129(6)
Rhodoplantae
135(2)
Cyanidiales
137(2)
Rhodophyta
139(2)
Proteorhodophytina
141(2)
Compsopogonophyceae
143(4)
Porphyridiophyceae
147(4)
Rhodellophyceae
151(4)
Stylonematales
155(4)
Eurhodophytina
159(2)
Bangiales
161(2)
Florideophyceae
163(2)
Hildenbrandiales
165(2)
Nemaliophycidae
167(4)
Corallinophycidae
171(2)
Ahnfeltiophycidae
173(2)
Rhodymeniophycidae
175(4)
Viridiplantae
179(4)
Chlorophyta
183(4)
Charophyta
187(4)
Klebsormidiophyceae
191(4)
Phragmoplastophyta
195(4)
Zygnematophyceae
199(4)
Coleochaetophyceae
203(2)
Charophyceae
205(6)
Embryophyta [ see Section 3]
SECTION 3
Embryophyta
211(4)
Hepaticae
215(4)
Musci
219(4)
Anthocerotae
223(4)
Pan-Tracheophyta
227(2)
Apo-Tracheophyta
229(2)
Tracheophyta
231(4)
Pan-Lycopodiophyta
235(2)
Lycopodiophyta
237(4)
Pan-Euphyllophyta
241(2)
Euphyllophyta
243(4)
Monilophyta
247(6)
Pan-Spermatophyta
253(2)
Apo-Spermatophyta
255(4)
Spermatophyta
259(4)
Pan-Gnetophyta
263(2)
Gnetophyta
265(4)
Pan-Coniferae
269(2)
Coniferae
271(4)
Cupressophyta
275(4)
Pan-Angiospermae
279(4)
Angiospermae [ see Section 4]
SECTION 4
Angiospermae
283(6)
Mesangiospermae
289(4)
Magnoliidae
293(4)
Monocotyledoneae
297(4)
Petrosaviidae
301(2)
Commelinidae
303(4)
Poineae
307(4)
Tricolpatae
311(2)
Eudicotyledoneae
313(4)
Gunneridae
317(4)
Pentapetalae
321(2)
Superrosidae
323(4)
Rosidae
327(4)
Malvidae
331(4)
Myrtales
335(4)
Fabidae
339(6)
Leguminosae
345(4)
Superasteridae
349(4)
Caryophyllales
353(4)
Asteridae
357(4)
Ericales
361(4)
Ericaceae
365(6)
Gentianidae
371(2)
Campanulidae
373(4)
Apiidae
377(4)
Campanulaceae
381(4)
Campanuloideae
385(2)
Lobelioideae
387(2)
Lamiidae
389(4)
Lamianae
393(4)
Gentianales
397(4)
Rubiaceae
401(2)
Solanales
403(4)
Solanaceae
407(4)
Convolvulaceae
411(2)
Lamiales
413(4)
Bignoniaceae
417(2)
Orobanchaceae
419(4)
Labiatae
423(4)
Nepetoideae
427(8)
SECTION 5
Metazoa
435(4)
Porifera
439(4)
Demospongiae
443(4)
Hexactinellida
447(2)
Homoscleromorpha
449(4)
Calcispongia
453(4)
Cnidaria
457(4)
Anthozoa
461(4)
Hexacorallia
465(4)
Octocorallia
469(4)
Medusozoa
473(4)
Cubozoa
477(4)
Hydrozoa
481(4)
Trachylina
485(4)
Hydroidolina
489(2)
Siphonophora
491(2)
Bilateria
493(4)
Protostomia
497(6)
Lophotrochozoa
503(4)
Annelida
507(4)
[ Platyhelminthes] Rhabdocoela
511(4)
Dalytyphloplanida
515(2)
Kalyptorhynchia
517(2)
Schizorhynchia
519(2)
Pan-Brachiopoda
521(6)
Brachiopoda
527(8)
Pan-Neoarticulata
535(8)
Neoarticulata
543(6)
[ Mollusca] Cephalopoda
549(4)
Nautilus
553(4)
Neocoleoidea
557(4)
Decapodiformes
561(4)
Vampyroteuthis
565(4)
Octopoda
569(4)
Ecdysozoa
573(2)
Nematomorpha
575(2)
Pan-Nematoda
577(2)
Nematoda
579(8)
[ Arthropoda] Branchiopoda
587(8)
Insecta
595(6)
Triichoptera
601(4)
[ Malacostraca/Decapoda] Polycarpidea
605(4)
Prochelata
609(4)
[ Arachnida] Araneae
613(4)
Mesothelae
617(2)
Opisthothelae
619(2)
Mygalomorphae
621(2)
Araneomorphae
623(2)
Deuterostomia
625(4)
Ambulacraria
629(2)
Hemichordata
631(2)
Enteropneusta
633(4)
Pterobranchia
637(4)
Pan-Echinodermata
641(4)
Echinodermata
645(4)
Edrioasterida†
649(2)
Isorophida†
651(2)
horophina†
653(2)
Agelacrinitidae†
655(2)
Lepidodiscina†
657(2)
Discocystinae†
659(2)
Chordata
661(2)
Cephalochordata
663(2)
Tunicata
665(4)
[ Vertebrata] [ see Section 6]
SECTION 6
[ Vertebrata] Pan-Gnathostomata
669(2)
Apo-Gnathostomata
671(4)
Gnathostomata
675(6)
Pan-Osteichthyes
681(4)
Osteichthyes
685(6)
Pan-Actinopterygii
691(4)
Actinopterygii
695(6)
Pan-Actinopteri
701(4)
Actinopteri
705(4)
Pan-Neopterygii
709(2)
Neopterygii
711(4)
Pan-Teleostei
715(4)
Teleostei
719(6)
Ostariophysi
725(4)
Otophysi
729(4)
Pan-Siluriformes
733(2)
Siluriformes
735(6)
[ Pan-Sarcopterygii/Sarcopterygii] Stegocephali
741(6)
Labyrinthodontia
747(4)
Anthracosauria†
751(4)
Seymouriamorpha†
755(4)
Tetrapoda
759(6)
Amphibia
765(8)
Lissamphibia
773(6)
Gymnophiona
779(6)
Caudata
785(4)
Pan-Amniota
789(4)
Amniota
793(8)
Pan-Mammalia = Synapsida [ see Section 7]
Reptilia [ see Section 8]
SECTION 7
Pan-Mammalia1
801(10)
Synapsida1
811(4)
Therapsida
815(14)
Cynodontia
829(14)
Mammaliamorpha
843(8)
Mammaliaformes
851(8)
Mammalia
859(8)
Pan-Monotremata
867(8)
Monotremata
875(16)
[ Theria/Placentalia] Pan-Xenarthra
891(4)
Xenarthra
895(4)
Scandentia
899(4)
Pan-Primates
903(4)
Primates
907(8)
Apo-Chiroptera
915(8)
Chiroptera
923(8)
Yinpterochiroptera
931(6)
Yangochiroptera
937(6)
Ungulata
943(6)
Artiodactyla
949(6)
Pan-Cetacea
955(4)
Cetacea
959(4)
Pan-Bovidae
963(2)
Cavicornia
965(4)
Bovidae
969(2)
Bovinae
971(4)
Antilopinae
975(4)
Pan-Carnivora
979(4)
Carnivora
983(6)
Pan-Feliformia
989(4)
Feliformia
993(6)
Pan-Caniformia
999(2)
Caniformia
1001(6)
Pan-Arctoidea
1007(2)
Arctoidea
1009(6)
Pan-Pinnipedia
1015(4)
Pinnipedia
1019(8)
SECTION 8
Reptilia
1027(6)
Diapsida
1033(8)
Pan-Testudines
1041(4)
Testudinata
1045(4)
Testudines
1049(4)
Pan-Pleurodira
1053(2)
Pleurodira
1055(4)
Pan-Cryptodira
1059(2)
Cryptodira
1061(4)
Sauria
1065(10)
Pan-Lepidosauria
1075(4)
Lepidosauria
1079(8)
Pan-Squamata
1087(6)
Squamata
1093(10)
Mosasauridae†
1103(6)
Pan-Gekkota
1109(4)
Gekkota
1113(6)
Pan-Amphisbaenia
1119(4)
Amphisbaenia
1123(8)
Pan-Serpentes
1131(4)
Serpentes
1135(10)
Pan-Iguania
1145(4)
Iguania
1149(6)
Pan-Iguanidae
1155(4)
Iguanidae
1159(6)
Pan-Acrodonta
1165(4)
Acrodonta
1169(6)
Pan-Archosauria
1175(4)
Archosauromorpha
1179(4)
Archosauriformes
1183(4)
Archosauria
1187(8)
Pterosauromorpha†
1195(6)
Pterosaurid†
1201(4)
Pterodactyloidea†
1205(4)
Dinosauria
1209(10)
Saurischia
1219(6)
Sauropodomorpha†
1225(10)
Theropoda
1235(12)
Aim
1247(8)
Galloanserae
1255(4)
[ Neoaves] Cuculidae
1259(6)
Mirandornithes
1265(4)
Charadriiformes
1269(4)
Procellariiformes
1273(4)
Strigiformes
1277(4)
Picidae
1281(4)
Psittaciformes
1285(4)
Daedalornithes
1289(4)
Apodiformes
1293(4)
Index 1297
Kevin de Queiroz is a vertebrate, evolutionary, and systematic biologist. He has worked in the phylogenetics and evolutionary biology of squamate reptiles, the development of a unified species concept and of a phylogenetic approach to biological nomenclature, and the philosophy of systematic biology. He received a B.S. in Biology from the University of California, Los Angeles (1978), a M.S. in Zoology from San Diego State University (1985), and a Ph.D. in Zoology from the University of California, Berkeley (1989). He was a Tilton Postdoctoral Fellow at the California Academy of Sciences and is currently a Research Zoologist and a curator of the collection of Amphibians and Reptiles at the National Museum of Natural History, Smithsonian Institution. He is a former president of the Society of Systematic Biologists and was the first president of the International Society for Phylogenetic Nomenclature.

D. Cantino received his Ph.D. from Harvard University and is currently Professor Emeritus in Environmental and Plant Biology at ohio University. His primary interests are angiosperm systematics (with emphasis on the phylogeny and taxonomy of Labiatae) and phylogenetic nomenclature, an alternative to traditional biological nomenclature that is designed to name the parts of the tree of life by explicit reference to phylogeny. He is an active member of the Committee on Phylogenetic Nomenclature.

Jacques Gauthier received a B.S. and M.S. degrees in Zoology at San Diego State University, and a PhD in Paleontology from the University of California, Berkeley, in 1984. Currently he is a Professor of Geology and Geophysics and Ecology and Evolutionary Biology and Curator of Vertebrate Paleontology and Vertebrate Zoology at Yale University. His published works include a classic work on the paleontology and phylogeny of the lizard clade Anguimorpha, the first major cladistic analysis of Diapsida, which argued for the monophyly of the dinosaurs, and an important paper on the origin of birds from theropods. Gauthier's corpus is remarkable in that he contributed the foundational phylogenetic studies of Archosauria and Lepidosauria, two major amniote clades; and he was the primary author of the foundational and still widely cited phylogenetic study of Amniota as a whole. More recently, he has argued together with Kevin de Queiroz for replacing Linnaean taxonomy with the PhyloCode. In addition to his theoretical work on systematics and taxonomy, Gauthier continues to study the anatomy and relationships of diapsids, particularly lepidosaurs. His lizard work currently focuses on Scincomorpha, following on a career-long interest in the unusual clade Xantusiidae.