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E-grāmata: Plant Transposable Elements: Impact on Genome Structure and Function

  • Formāts: PDF+DRM
  • Sērija : Topics in Current Genetics 24
  • Izdošanas datums: 08-Jan-2013
  • Izdevniecība: Springer-Verlag Berlin and Heidelberg GmbH & Co. K
  • Valoda: eng
  • ISBN-13: 9783642318429
  • Formāts - PDF+DRM
  • Cena: 213,54 €*
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  • Formāts: PDF+DRM
  • Sērija : Topics in Current Genetics 24
  • Izdošanas datums: 08-Jan-2013
  • Izdevniecība: Springer-Verlag Berlin and Heidelberg GmbH & Co. K
  • Valoda: eng
  • ISBN-13: 9783642318429

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This book gives an overview of the impact of transposable elements on plant genomes and explains how to recognize and study transposable elements. Includes many examples and case studies.



Transposable elements are short lengths of DNA with the capacity to move between different points within a genome. This process can affect the function of genes at or near the insertion site. The present book gives an overview of the impact of transposable elements on plant genomes and explains how to recognize and study transposable elements, e.g. by using state-of-the-art strategies like “new generation sequencing.” Moreover, the impact of transposable elements on plant genome structure and function is reviewed in detail, and also illustrated in examples and case studies.The book is intended both for readers familiar with the field and for newcomers. With large-scale sequencing becoming increasingly available, more and more people will come across transposable element sequences in their data, and this volume will hopefully help to convince them that they are not just “junk DNA.”

Recenzijas

From the reviews:

For the 16 chapters of this volume, the editors have brought together contributors from all corners of the diverse field of transposon biology. This volume is pitched to both transposon biologists and to nonspecialists. the book provides a good introduction to this very broad research field and will be a key reference for specialists. (J. Arvid Ågren, The Quarterly Review of Biology, Vol. 88 (3), September, 2013)

1 So Many Repeats and So Little Time: How to Classify Transposable Elements
1(16)
Thomas Wicker
2 Transposable Element Annotation in Completely Sequenced Eukaryote Genomes
17(24)
Timothee Flutre
Emmanuelle Permal
Hadi Quesneville
3 Using Nextgen Sequencing to Investigate Genome Size Variation and Transposable Element Content
41(18)
Concepcion Munoz-Diez
Clementine Vitte
Jeffrey Ross-Ibarra
Brandon S. Gaut
Maud I. Tenaillon
4 Genome-Wide Analysis of Transposition Using Next Generation Sequencing Technologies
59(12)
Moaine Elbaidouri
Olivier Panaud
5 Hitching a Ride: Nonautonomous Retrotransposons and Parasitism as a Lifestyle
71(18)
Alan H. Schulman
6 Plant Endogenous Retroviruses? A Case of Mysterious ORFs
89(24)
Howard M. Laten
Garen D. Gaston
7 MITEs, Miniature Elements with a Major Role in Plant Genome Evolution
113(12)
Helene Guermonprez
Elizabeth Henaff
Marta Cifuentes
Josep M. Casacuberta
8 Glue for Jumping Elements: Epigenetic Means for Controlling Transposable Elements in Plants
125(22)
Thierry Pelissier
Olivier Mathieu
9 Responses of Transposable Elements to Polyploidy
147(22)
Christian Parisod
Natacha Senerchia
10 Noise or Symphony: Comparative Evolutionary Analysis of Sugarcane Transposable Elements with Other Grasses
169(24)
Nathalia de Setta
Cushla J. Metcalfe
Guilherme M.Q. Cruz
Edgar A. Ochoa
Marie-Anne Van Sluys
11 Helitron Proliferation and Gene-Fragment Capture
193(26)
Yubin Li
Hugo K. Dooner
12 Transposable Element Exaptation in Plants
219(34)
Douglas R. Hoen
Thomas E. Bureau
13 SINE Exaptation as Cellular Regulators Occurred Numerous Times During Eukaryote Evolution
253(20)
Jean-Marc Deragon
14 LTR Retrotransposons as Controlling Elements of Genome Response to Stress?
273(24)
Quynh Trang Bui
Marie-Angele Grandbastien
15 Rider Transposon Insertion and Phenotypic Change in Tomato
297(16)
Ning Jiang
Sofia Visa
Shan Wu
Esther van der Knaap
16 Retrotransposons and the Eternal Leaves
313(12)
Antonella Furini
Index 325