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Systemic Approaches in Bioinformatics and Computational Systems Biology: Recent Advances [Hardback]

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"This book presents new techniques that have resulted from the application of computer science methods to the organization and interpretation of biological data, covering three subject areas: bioinformatics, computational biology, and computational systems biology"--

Contributors mostly from technical disciplines, but also from biology, present recent studies on the convergence of computer science and mathematics with systems biology. They focus on experimental data analysis, knowledge inference, modeling and simulations, and computational sequence design and analysis. Their topics include data analysis and interpretation in metabolomics, computational sequence design techniques for DNA microarray technologies, recognizing translation initiation sites in Arabidopsis thaliana, the role of stochastic simulations to extend food web analysis, intelligent classifier fusion for enhancing recognition of genes and the protein pattern of heredity diseases, and translating life science discoveries to disease treatments and vice versa. Annotation ©2012 Book News, Inc., Portland, OR (booknews.com)
Foreword xi
Foreword xiii
Preface xiv
Acknowledgment xvii
Section 1
Chapter 1 Unsupervised Data Analysis Methods used in Qualitative and Quantitative Metabolomics and Metabonomics
1(28)
Miroslava Cuperlovic-Culf
Chapter 2 Data Analysis and Interpretation in Metabolomics
29(28)
Jose M. Garcia-Manteiga
Chapter 3 Computational Sequence Design Techniques for DNA Microarray Technologies
57(35)
Dan Tulpan
Roberto Montemanni
Chapter 4 Promoter Structures Conserved between Homo Sapiens, Mus Musculus and Drosophila Melanogaster
92(13)
Boris R. Jankovic
John A. C. Archer
Rajesh Chowdhary
Ulf Schaefer
Chapter 5 Recognition of Translation Initiation Sites in Arabidopsis Thaliana
105(13)
Haitham Ashoor
Section 2
Chapter 6 The Present and the Future Perspectives of Biological Network Inference
118(23)
Paola Lecca
Alida Palmisano
Chapter 7 Structural and Dynamical Heterogeneity in Ecological Networks
141(22)
Ferenc Jordan
Carmen Maria Livi
Paola Lecca
Chapter 8 The Role of Stochastic Simulations to Extend Food Web Analyses
163(34)
Marco Scotti
Chapter 9 Process Algebra Models in Biology: The Case of Phagocytosis
197(23)
Ozan Kahramanogullari
Chapter 10 Intelligent Classifiers Fusion for Enhancing Recognition of Genes and Protein Pattern of Hereditary Diseases
220(29)
Parthasarathy Subhasini
Dieter Roller
Marimuthu Krishnaveni
Chapter 11 Connecting the Bench with the Bedside: Translating Life Science Discoveries to Disease Treatments and Vice Versa
249(19)
Yue Wang Webster
Ernst R. Dow
Mathew J. Palakal
Compilation of References 268(38)
About the Contributors 306(7)
Index 313